|
缘起 很多在中国气象网下载的站点降水数据多为 txt格式，读写起来甚为不便，于是便萌生了将其制作为 netcdf 文件的想法。 原始数据格式（txt）及形式逐列显示，通过将其导入到matlab中，显示如下
制作好之后的netcdf文件为以（日，月，年，站点ID）为索引的数据，用matlab的ncdisp()函数的显示结果如下： [C] 纯文本查看 复制代码 >> ncdisp('Precip_Daily_2481stations_China.nc')[/color][/p][p=null, 2, left]
Source:
H:\TempData\SationPrecp\Precip_Daily_2481stations_China.nc
Format:
64bit
Global Attributes:
Title = 'Station daily rainfall data'
Data Period = '1951-2018'
Author = 'Dayon, SYSU, Email:wangdy58@mail2.sysu.edu.cn'
History = 'created on: 04-Mar-2021 10:12:52'
Dimensions:
numStat = 2481
year = 68
mon = 12
day = 31
Variables:
stid
Size: 2481x1
Dimensions: numStat
Datatype: single
lon
Size: 2481x1
Dimensions: numStat
Datatype: single
Attributes:
longname = 'longitude'
units = 'degrees_east'
lat
Size: 2481x1
Dimensions: numStat
Datatype: single
Attributes:
longname = 'latitude'
bounds = 'degrees_north'
alt
Size: 2481x1
Dimensions: numStat
Datatype: single
Attributes:
longname = 'height above sea level'
units = 'm'
Prec
Size: 31x12x68x2481
Dimensions: day,mon,year,numStat
Datatype: single
Attributes:
longname = 'daily rainfall'
units = 'mm/day'
_FillValue = -999
missing_value = -999
制作流程 $ `3 }( u2 f3 c+ ~
总体步骤为 0. create nc file（创建nc文件） 1. define dimensions（定义维度） 2. define variables（定义变量） 3. put variables into nc（导入变量） 4. put attribute into nc（导入变量属性） 5. define global attribution（定义全局属性） ' I( ~8 x" |$ W5 T6 {
7 v# r2 O" l0 Y _
8 I _" {# ^1 U
1. 创建nc文件 3 b1 D: U- Q9 w
[C] 纯文本查看 复制代码 outDir = 'H:\TempData\SationPrecp';
outFile = 'Precip_Daily_2481stations_China.nc';
outDirFile = [outDir, '\', outFile];
outid = netcdf.create(outDirFile, '64BIT_OFFSET'); ; I. ~' g R- S9 C: u
【提示】事先想好需要存储变量的结构及维度，之后需要注意的是创建 nc 文件的 类 型类型，以下供参考： 类型名 | 描述 | ‘NOCLOBBER’ | Prevent overwriting of existing file with the same name.（不覆盖已经有的同名文件） | 'CLOBBER' | Overwrite any existing file with the same name.（覆盖任何已有的同名文件） | 'SHARE' | Allow synchronous file updates.（允许同步文件更新） | '64BIT_OFFSET' | Allow easier creation of files and variables which are larger than two gigabytes.（可创建>2G的文件） | 'NETCDF4' | Create a NetCDF-4/HDF5 file（普通） | 'CLASSIC_MODEL' | Enforce the classic model; has no effect unless used in a bitwise-or with NETCDF4 |
( A0 P' l; R: P0 }4 K7 _$ a2 b
9 e. F4 f! Y9 p# I2.定义维度
) G5 K$ S+ }0 x
[C] 纯文本查看 复制代码 numStatdimID = netcdf.defDim(outid,'numStat', 2481);
yeardimID = netcdf.defDim(outid,'year', 68);
mondimID = netcdf.defDim(outid,'mon', 12);
daydimID = netcdf.defDim(outid,'day', 31); 3.定义变量
2 D4 F& g$ O; g+ y9 [1 y3 P
[C] 纯文本查看 复制代码 lon_id = netcdf.defVar(outid,'lon','NC_FLOAT', numStatdimID);
lat_id = netcdf.defVar(outid,'lat','NC_FLOAT', numStatdimID);
alt_id = netcdf.defVar(outid,'alt','NC_FLOAT', numStatdimID);
Prec_id = netcdf.defVar(outid,'Prec','NC_FLOAT',[daydimID, mondimID, yeardimID, numStatdimID]);
netcdf.endDef(outid); 4.导入变量 ! }0 K+ z5 i+ f+ A
[C] 纯文本查看 复制代码 netcdf.putVar(outid, lon_id, UnqLon/100);
netcdf.putVar(outid, lat_id, UnqLat/100);
netcdf.putVar(outid, alt_id, UnqAlt/100);
netcdf.putVar(outid, Prec_id, Precmmd);
netcdf.reDef(outid);
0 b# b1 E1 ~9 Q! H
【提示】注意放置的数据时，变量一定要和自己在 2.定义维度 时的矩阵形状完全一致才行！这个形状也就是matllab 中用 ncdisp()函数显示出来的矩阵形状。
% v& g8 d; `$ K/ W- d, v; p& t% H
5. 导入变量属性 0 x" j# E* d: t t, C$ T
[C] 纯文本查看 复制代码 netcdf.putAtt(outid, lon_id, 'longname', 'longitude');
netcdf.putAtt(outid, lon_id, 'units', 'degrees_east');
netcdf.putAtt(outid, lat_id, 'longname', 'latitude');
netcdf.putAtt(outid, lat_id, 'bounds', 'degrees_north');
netcdf.putAtt(outid, alt_id, 'longname', 'height above sea level');
netcdf.putAtt(outid, alt_id, 'units', 'm');
netcdf.putAtt(outid, Prec_id, 'longname', 'daily rainfall');
netcdf.putAtt(outid, Prec_id, 'units', 'mm/day');
netcdf.putAtt(outid, Prec_id, '_FillValue', single(-999));
netcdf.putAtt(outid, Prec_id, 'missing_value', single(-999));
6. 定义全局属性
- O$ B( K2 M) r9 D# l- ~0 }
[C] 纯文本查看 复制代码 netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'title', 'station daily rainfall data');
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'Data_Period', '1951-2018');
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'Author', 'Dayon, SYSU, Email : [email]wangdy58@mail2.sysu.edu.cn[/email]');
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'History', ['created on: ',datestr(now)]);
netcdf.close(outid);
源代码 ! x$ g4 B) S; d2 A7 a
[C] 纯文本查看 复制代码 % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
% Aim: this script aim at transfering Precp data of Station to nc type file
% Date: 2022-01-21
% Author: Dayon, Sun Yat-sen University
% % % % % % % % % % % % % % % % % % % % % % % % % % % % % % % %
tic
clc; clear;
% read data from station
inDir = ('H:\TempData\SationPrecp');
inFile = ('PREC_Station_data.mat');
inDirFile = [inDir, '\', inFile];
load (inDirFile);
stationId = PREC(:, 1);
N = length(stationId);
Lat = PREC(:, 2);
Lon = PREC(:, 3);
Alt = PREC(:, 4);
Year = PREC(:, 5);
Month = PREC(:, 6);
Day = PREC(:, 7);
ValPrecp = PREC(:, 8);
[Unqid, ind, ~] = unique(stationId, 'stable');
UnqLat = Lat(ind);
UnqLon = Lon(ind);
UnqAlt = Alt(ind);
numStat = length(Unqid);
for i = 1 : numStat
stationId(stationId == Unqid(i)) = i;
end
YRbeg = min(Year);
YRend = max(Year);
numYR = YRend - YRbeg + 1;
for j = 1 : numYR
Year(Year == YRbeg + j - 1 ) = j;
end
Precmmd = -999 * ones(31, 12, numYR, numStat);
for k = 1 : N
iDay = Day(k);
iMon = Month(k);
iYear = Year(k);
iStat = stationId(k);
Precmmd(iDay, iMon, iYear, iStat) = ValPrecp(k);
% check schedule
if mod(k, 10^6) == 0
disp(['----- ',num2str(k),' -----'])
end
end
Precmmd = single(Precmmd);
% PREC = [Day, Month, Year, stationId];
%----------------------------------------------------------------------
% make nc
%----------------------------------------------------------------------
outDir = 'H:\TempData\SationPrecp';
outFile = 'Precip_Daily_2481stations_China.nc';
outDirFile = [outDir, '\', outFile];
outid = netcdf.create(outDirFile, '64BIT_OFFSET');
% define dimensions
numStatdimID = netcdf.defDim(outid,'numStat', 2481);
yeardimID = netcdf.defDim(outid,'year', 68);
mondimID = netcdf.defDim(outid,'mon', 12);
daydimID = netcdf.defDim(outid,'day', 31);
% define variables
station_id = netcdf.defVar(outid,'stid','NC_FLOAT', numStatdimID);
lon_id = netcdf.defVar(outid,'lon','NC_FLOAT', numStatdimID);
lat_id = netcdf.defVar(outid,'lat','NC_FLOAT', numStatdimID);
alt_id = netcdf.defVar(outid,'alt','NC_FLOAT', numStatdimID);
Prec_id = netcdf.defVar(outid,'Prec','NC_FLOAT',[daydimID, mondimID, yeardimID, numStatdimID]);
netcdf.endDef(outid);
% put variables into nc
netcdf.putVar(outid, station_id, Unqid);
netcdf.putVar(outid, lon_id, UnqLon/100);
netcdf.putVar(outid, lat_id, UnqLat/100);
netcdf.putVar(outid, alt_id, UnqAlt/100);
netcdf.putVar(outid, Prec_id, Precmmd);
netcdf.reDef(outid);
% put attribute into nc
netcdf.putAtt(outid, lon_id, 'longname', 'original station id');
netcdf.putAtt(outid, lon_id, 'longname', 'longitude');
netcdf.putAtt(outid, lon_id, 'units', 'degrees_east');
netcdf.putAtt(outid, lat_id, 'longname', 'latitude');
netcdf.putAtt(outid, lat_id, 'bounds', 'degrees_north');
netcdf.putAtt(outid, alt_id, 'longname', 'height above sea level');
netcdf.putAtt(outid, alt_id, 'units', 'm');
netcdf.putAtt(outid, Prec_id, 'longname', 'daily rainfall');
netcdf.putAtt(outid, Prec_id, 'units', 'mm/day');
netcdf.putAtt(outid, Prec_id, '_FillValue', single(-999));
netcdf.putAtt(outid, Prec_id, 'missing_value', single(-999));
% define global attribution
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'Title', 'Station daily rainfall data');
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'Data Period', '1951-2018');
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'Author', 'Dayon, SYSU, Email : [email]wangdy58@mail2.sysu.edu.cn[/email]');
netcdf.putAtt(outid, netcdf.getConstant('NC_GLOBAL'), 'History', ['created on: ',datestr(now)]);
netcdf.close(outid);
toc
+ Y g& o7 V7 t/ a5 x/ |7 W3 m9 T& ^
. f8 L4 s6 l! f |
